Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817439.1_cds_XP_016499180.1_13130
CDS Infomation

[gene=LOC107817815] [db_xref=GeneID:107817815] [protein=protein RRC1-like isoform X3] [protein_id=XP_016499180.1] [location=join(16013..16045,16134..16280,17129..17245,17333..17498,19079..19191,19611..19682,21094..21315,21692..21750,22079..22163,22275..22412,22697..22921,23032..23831,24495..24661,25671..25903)] [gbkey=CDS]
Sequence

ATGGCAACAAAGGGCAGAGATTATGAGAAGAAGAAGGAGGATAAGCCGAGGGAAAAAGAG
AAGGGCAAGTCTAGGAACATCGACAATTTCATGGAGGAATTGAAGCATGAACAAGAAATG
AGGGAAAGGCGTAACCAAGACCGTGAACAGTGGCGTGATCGTCATACTGAAAATTCTACT
CCATCTAGTCGGTTTGATGAGCTGCCTGATGACTTTGATCCTAGTGGAAGGCCTGGATCA
TTTGATGATGGCGATCCACAAACAACAAATCTCTATGTAGGAAACCTATCACCTCAGGTT
GATGAGAATTTTCTTTTGCGCACATTTGGGAGATTTGGCCCCATTGCAAGTGTAAAGATA
ATGTGGCCAAGGACAGAAGAAGAAAGAAGGCGACAGAGGAATTGTGGTTTTGTAGCTTTC
ATGAATAGAGCTGATGCTCAGGCTGCAAAAGATGAGATGGAAGGAGTTATTGTTTATGAA
TATGAGTTGAAGATTGGGTGGGGTAAATCTGTCTCTCTGCCTTCTCAAGCGCTTCCTGCT
CCCCCTCCAGGACATATGGCTATCAGGAGTAAGGAGGGTGCAACTGTTATCTTATCTGGT
CCATCAGGTCCTCCGGTTACTACTGTTTCAGGCCAGAACTCTGAGTTGGTTCTCACTCCA
AATGTACCAGATATTATGGTTGTTCCACCCGAGGATGATCACCTTCGCCACGTTATTGAT
ACAATGGCTCTGTATGTTCTTGATGGAGGTTGTGCTTTTGAACAAGCCATAATGGAGCGA
GGCCGTGGAAATCCTCTCTTCAGTTTCTTGTTTGAGCTTGGCTCAAAGGAGCATACTTAC
TACGTTTGGAGGCTTTATTCTTTTGCTCAGGGAGATACTCTTCAACGTTGGCGCACAGTG
CCTTTCATCATGATAACTGGTAGTGGGAGGTGGATACCACCACCTCTACCAACACCTAAA
GGAGCTGAGCATGAAAAAGAATCTGGGAGCACATTTGCTGCTGGAAGAAGCAGGCGTGTG
GAGGTTGAAAGGACATTGACTGATGCTCAGAGGGATGAATTTGAGGATATGCTCCGGTCA
TTGACACTAGAAAGAAGTCAAATAAAAGAAGCGATGGGTTTTGCTTTGGACAATGCTGAT
GCTGCTGGAGAGGTTGTTGAAGTTTTGACAGAGTCTTTGACCCTCAAGGAAACTCCAATA
CCAACAAAAGTTTCTAGGCTCATGCTTGTCTCTGATATTCTTCATAATAGTAGTGCTCCT
GTGAAGAATGCATCTGCTTATCGCACCAAATTTGAAGCCTCTTTACCAGACATAATGGAA
AGCTTCAATGATCTATACCGAAGTATAACAGGACGAATAACTGCCGAGGCACTTAAAGAA
AGAGTGCTGAAAGTGCTTCAAGTGTGGGCTGATTGGTTTTTGTTTTCTGATGCCTATGTT
AATGGTTTACGAGCAACCTTTCTTCGAACCGGGAACTCTGGTGTGATCCCATTTCATTCT
CTGTGTGGTGATGCACCTGAAGTAGAACAAAAGACCAGTTCTGATGATGCAGGTGATGGC
GGTAAGATTAACCCGGATGGTGCTTTGGCAATTGGGAAAGGAGCTGCAACGAAGGAACTG
TTGAGCCTTCCCCTTACTGAGCTAGAAAGACGATGCAGGCACAATGGTTTGTCTATTGTA
GGCGGTAGGGAAATGATGGTTGCTCGGTTACTTTATCTGGAAGAGGCTGAAAAGCTGAGA
GGTCATGAACTAGATGAAGATTTGAAATTTGTGGGCCATTCAAGTTCTGTTAGGTTCCCA
AGCAGCCGGAAAGATAGCAACCTTGAGTTGGATAGAAGTGCTCCTTCTGCATGGAATAGT
CAAGTGGATTATGACGTGCAACTCAAACAAAGAGACTCTGTATCTTCACCCCCAACTATT
TCTGTTCTACAGCATAATTCAATTGACTTTTCCAGTGAGGGCAAAAATGACACAATTTTG
CCTACATCTAAATGGGCCAGGGAGGATGACGAAAGTGATGATGAACAAAAGAGAAGTTCG
AGGGACCTGGGGTTGACATATTCATCATCTGGAAGTGAGAACGCTGGTGATGGCCTTAGC
AAGATCAAGGATACAGAGCTTACAACAGACACAAGCAATTCAGCATACCCGGAAAGTGGA
ATGAACGAAGAATTGAGACAAAAGCTGAGGCGTCTAGAGGTTGCATTGATTGAATATCGT
GAATCTCTAGAAGAGCGAGGAATAAAAAGTTCAGATGAAATTGAGAGGAAAGTTGAAATC
CATCGGCAACTTCTACAATCTGAATTTGGTTTATTGAATTTCAGTGAAGATAATTCCAAA
AAAGCAGGTAGGTCATCTTTGGAGCGGAGAGAGAAAAGAGACGATTCTCGTGAAGCTTCA
AGGAAGCGCCAACGGAGCCGCAGCAGAAGTGGAAGCCCTCAGTGGAAATCTTCCGGCCGA
GACCGTGATAGTGATAGGGAAAGGGAAAAGCGCCGTGAGAGGGAAAGGAAGAGTGGAAGC
AGGGAGAGAGATGATCATGATAGAGAGAAATCCAGGGAGAGAAGACGGGCCAGATGA

Peptide Sequence

PEP ID

XP_016499180.1
PEP Infomation

PREDICTED: protein RRC1-like isoform X3 [Nicotiana tabacum]
Sequence

MATKGRDYEKKKEDKPREKEKGKSRNIDNFMEELKHEQEMRERRNQDREQWRDRHTENST
PSSRFDELPDDFDPSGRPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKI
MWPRTEEERRRQRNCGFVAFMNRADAQAAKDEMEGVIVYEYELKIGWGKSVSLPSQALPA
PPPGHMAIRSKEGATVILSGPSGPPVTTVSGQNSELVLTPNVPDIMVVPPEDDHLRHVID
TMALYVLDGGCAFEQAIMERGRGNPLFSFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTV
PFIMITGSGRWIPPPLPTPKGAEHEKESGSTFAAGRSRRVEVERTLTDAQRDEFEDMLRS
LTLERSQIKEAMGFALDNADAAGEVVEVLTESLTLKETPIPTKVSRLMLVSDILHNSSAP
VKNASAYRTKFEASLPDIMESFNDLYRSITGRITAEALKERVLKVLQVWADWFLFSDAYV
NGLRATFLRTGNSGVIPFHSLCGDAPEVEQKTSSDDAGDGGKINPDGALAIGKGAATKEL
LSLPLTELERRCRHNGLSIVGGREMMVARLLYLEEAEKLRGHELDEDLKFVGHSSSVRFP
SSRKDSNLELDRSAPSAWNSQVDYDVQLKQRDSVSSPPTISVLQHNSIDFSSEGKNDTIL
PTSKWAREDDESDDEQKRSSRDLGLTYSSSGSENAGDGLSKIKDTELTTDTSNSAYPESG
MNEELRQKLRRLEVALIEYRESLEERGIKSSDEIERKVEIHRQLLQSEFGLLNFSEDNSK
KAGRSSLERREKRDDSREASRKRQRSRSRSGSPQWKSSGRDRDSDREREKRRERERKSGS
RERDDHDREKSRERRRAR

Transcript Sequence

Gene sequence data has not been registered.